Community Modeling


USGS Patuxent Wildlife Research Center (link)


Collaborators

Amielle DeWan
Defenders of Wildlife

Bob Dorazio
USGS Florida Integrated Science Center

Jim Hines
USGS Patuxent Wildlife Research Center

Marc K
éry
Swiss Ornithological Institute

Viviana Ruiz-Gutiérrez
Cornell University Laboratory of Ornithology

John Sauer
USGS Patuxent Wildlife Research Center


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References

DeWan, A.A., Zipkin, E.F., 2010. An integrated sampling and analysis approach for improved biodiversity monitoring. Environmental Management, In press.

Dorazio, R.M., M. Kery, J.A. Royle, Plattner, M., 2010. Models for inference in dynamic metacommunity systems. Ecology, In press.

Dorazio, R.M., Royle, J.A., 2005. Estimating size and composition of biological communities by modeling the occurrence of species. Journal of American Statistical Association 100, 389-398.


Dorazio, R. M., Royle, J.A., Söderström, B., Glimskär, A., 2006. Estimating species richness and accumulation by modeling species occurrence and detectability. Ecology 87, 842–854.

Kéry, M., 2010. Species richness and community dynamics – a conceptual framework. in O’Connell, A.F., Nichols, J.D., and Karanth, U.K. (eds.) Camera traps in animal ecology: Methods and analyses. Springer, Tokyo.

Kéry, M., Royle, J.A., 2008. Hierarchical Bayes estimation of species richness and occupancy in spatially replicated surveys. Journal of Applied Ecology 45, 589-598.

Kéry, M., Royle, J.A., 2009. Inference about species richness and community structure using species-specific occupancy models in the National Swiss Breeding Bird Survey MHB, in: Thomson, D. L., Cooch, E. G., Conroy, M. J. (Eds.), Modeling Demographic Processes in Marked Populations. Springer, pp. 639-656.

Kéry, M., Royle, J.A., Plattner, M., Dorazio, R.M., 2009. Species richness and occupancy estimation in communities subject to temporary emigration. Ecology 90, 1279-1290.

Kéry, M., Royle, J.A., Schmid, H., 2008. Importance of sampling design and analysis in animal population studies: A comment on Sergio et al. Journal of Applied Ecology 45, 981–986.

Russell, R.E., Royle, J.A., Saab, V.A., Block, W.M., Lehmkuhl, J.F., Sauer, J.R., 2009. Modeling the response of wildlife communities to environmental disturbance: quantifying the effect of prescribed fire treatments on avian communities in a coniferous forest in Washington. Ecological Applications 19, 1253-126.


Walls, S.C., J.H. Waddle, Dorazio, R.M., In review. Estimating occupancy dynamics in an assemblage of anuran amphibians. Journal of Wildlife Management.

Zipkin, E.F., DeWan, A., Royle, J.A., 2009. Impacts of forest fragmentation on species richness: a hierarchical approach to community modelling. Journal of Applied Ecology 46, 815-822.

Zipkin, E.F., Royle, J.A., Dawson, D.K., Bates, S., 2010. Multi-species occurrence models to evaluate the effects of conservation and management actions. Biological Conservation 143, 479-484.